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Annotation type
3
target gene predictions
1
chromatin state
Annotation Category
3
Target gene links
1
cis-regulatory elements
Annotation type Category
2
pCHi-C
1
Capture-C
1
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
5323
tissue
2517
primary cell
2352
cell line
470
in vitro differentiated cells
4
stem cell
Biosample term
1
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
1
connective tissue
1
embryo
Life stage
1
embryonic
Date released
2
March, 2020
1
August, 2017
1
September, 2023
Software used
2
nospecificsoft_customcode
1
chicago
1
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
1
Struan F.A. Grant, CHOP
Project
4
AMP
Collection Tags
2
DGA
1
AMP
RFA
3
AMP
1
AMP2
Showing 4 of 4 results
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FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR579JEW
released
Annotation file set
: A target gene prediction annotation in Human Mesendoderm of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP