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Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
16
primary cell
7
in vitro differentiated cells
2
tissue
1
cell line
1
stem cell
Biosample term
1
islet of Langerhans
1
thymus
Organ
1
pancreas
1
thymus
Life stage
1
adult
Date released
1
January, 2020
1
May, 2020
Software used
1032
r
511
chromhmm
478
encode-ccres
314
macs
88
qTLtools
48
deltasvm
28
abc
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
21
nospecificsoft_customcode
16
deseq2
12
matrix-eQTL
8
fastqtl
8
hiccups
5
peer
4
unknown
3
mach2qtl
2
chicago
2
combined S2G strategy
2
emmax
2
rasqual
1
bimbam
1
eigenmt
1
epacts
1
fast-lmm
1
haploview
1
probabel
1
snap
1
spp
Lab
2
AMP-T2D consortium
Project
2
AMP
Collection Tags
1
BLUEPRINT
1
T1D
1
T2DKP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR149GJC
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of thymus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299XDW
released
Annotation file set
: Target gene prediction annotation derived from chromatin loops in islet pcHi-C
Lab:
AMP-T2D consortium
Project:
AMP