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Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
3
A673
Disease term
15
neuroblastoma
6
Burkitt lymphoma
6
acute lymphoblastic leukemia
6
prostate adenocarcinoma
4
anosmia
3
Ewing sarcoma
3
Philadelphia-positive myelogenous leukemia
3
colon carcinoma
3
hepatocellular carcinoma
3
lung adenocarcinoma
3
lung large cell carcinoma
3
osteosarcoma
3
pancreatic ductal adenocarcinoma
3
retinoblastoma
3
testicular embryonal carcinoma
2
diabetes mellitus,hypertensive disorder
1
chronic kidney disease
1
hypertensive disorder
1
hypertensive disorder, chronic kidney disease
Organ
3
musculature of body
Life stage
3
child
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
tsv
organ_slims!
lymphoid tissue
relevant_life_stage!
adult
Showing 3 of 3 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR705BMV
released
Annotation file set
: Chromatin states for BSS00035 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP