Search – Common Metabolic Diseases Genome Atlas

Showing 10 of 10 results

FileSet
DSR291812
released
Embeddings file set: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR186384
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR547861
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR856740
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR940154
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR384UWH
released
Embeddings file set: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR838CLG
released
Embeddings file set: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab: Bing Ren, UCSD
Project: ENCODE
FileSet
DSR722OVR
released
Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab: Xin Sun, UCSD
Project: LungMap
FileSet
DSR322WJB
released
Embeddings file set: Islet snATAC-seq from control samples
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR047LET
released
Embeddings file set: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab: Kyle Gaulton, UCSD
Project: T1D