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Schema
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Embeddings type
3
Gene expression
2
Accessible chromatin
Embeddings Category
5
umap
Underlying Assay
10X scRNA-seq
2
10X snATAC-seq
2
10X snRNA-seq
1
Smart-seq
Available data
4
h5ad
3
tsv
2
mtx
1
rds
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
3
skeletal muscle
2
skeletal muscle tissue
Tissue term
4
skeletal muscle tissue
1
skeletal muscle
Organ
5
musculature of body
5
pancreas
3
artery
3
blood vessel
3
heart
3
vasculature
2
adipose tissue
2
connective tissue
2
liver
2
lung
1
blood
1
bodily fluid
1
bone element
1
brain
1
kidney
Life stage
2
adult
Date released
2
April, 2025
2
May, 2022
1
June, 2025
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
embeddings_underlying_assay!
10X scRNA-seq
Showing 5 of 5 results
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FileSet
DSR759180
released
Embeddings file set
: Single cell reference map of human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR603575
released
Embeddings file set
: This snRNAseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR186384
released
Embeddings file set
: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384UWH
released
Embeddings file set
: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP