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Embeddings type
2
Gene expression
1
Accessible chromatin
Cohort
1
HPAP
Embeddings Category
3
umap
Underlying Assay
10X snATAC-seq
1
10X scATAC-seq
1
10X scRNA-seq
Available data
h5ad
4
mtx
4
rds
3
tsv
File set status
3
released
Organism
2
Homo sapiens
Biosample type
3
tissue
Biosample term
2
islet of Langerhans
1
heart
Tissue term
2
pancreas
1
heart
Organ
2
pancreas
1
heart
Date released
1
June, 2025
1
March, 2024
1
October, 2024
Lab
2
Kyle Gaulton, UCSD
1
Franck Mauvais-Jarvis Lab
Project
2
AMP
1
community
RFA
1
AMP
1
AMP2
1
community
embeddings_underlying_assay!
10X snATAC-seq
files.file_type!
h5ad
Showing 3 of 3 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR867WVO
released
Embeddings file set
: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP