Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
10X snATAC-seq
2
10X snRNA-seq
1
sciATAC-seq
Available data
42
h5ad
13
rds
4
mtx
3
tsv
File set status
3
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
heart
1
skeletal muscle tissue
1
tissues
Tissue term
1
heart
1
skeletal muscle tissue
1
tissues
Organ
1
heart
1
musculature of body
Life stage
1
adult
Date released
1
February, 2023
1
May, 2022
1
November, 2021
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
embeddings_underlying_assay!
10X snATAC-seq
Showing 3 of 3 results
table-tab-icon
matrix-icon
FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE