Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
2
10X scRNA-seq
10X snATAC-seq
1
sciATAC-seq
Available data
2
h5ad
2
mtx
1
tsv
File set status
3
released
Organism
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
2
islet of Langerhans
1
pancreas
1
peripheral blood mononuclear cell
1
tissues
Tissue term
2
pancreas
1
blood
1
tissues
Organ
2
pancreas
1
blood
1
bodily fluid
Date released
1
August, 2021
1
November, 2021
1
October, 2024
Lab
1
Bing Ren, UCSD
1
Franck Mauvais-Jarvis Lab
1
Kyle Gaulton, UCSD
Project
1
ENCODE
1
T1D
1
community
RFA
1
ENCODE3
1
T1D
1
community
embeddings_underlying_assay!
10X snATAC-seq
organism.scientific_name!
Homo sapiens
Showing 3 of 3 results
table-tab-icon
matrix-icon
FileSet
DSR867WVO
released
Embeddings file set
: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D