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Embeddings type
3
Gene expression
Embeddings Category
3
umap
Underlying Assay
2
10X snRNA-seq
1
10X scRNA-seq
Smart-seq
Available data
2
h5ad
1
mtx
1
rds
1
tsv
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
3
heart
Tissue term
7
pancreas
4
skeletal muscle tissue
3
heart
2
blood
2
lung
1
carotid canal
1
kidney
1
leukocyte
1
tissues
Organ
2
heart
Life stage
1
adult
Date released
1
February, 2023
1
June, 2025
1
September, 2020
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
2
AMP
1
AMP2
embeddings_underlying_assay!
Smart-seq
Showing 3 of 3 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP