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Embeddings type
6
Accessible chromatin
Embeddings Category
6
umap
Underlying Assay
38
10X scRNA-seq
28
Smart-seq
6
10X snATAC-seq
4
10X snRNA-seq
1
10X scATAC-seq
1
sciATAC-seq
Available data
7
h5ad
6
tsv
mtx
1
bed bed3
1
cloupe
1
tbi
File set status
6
released
Organism
6
Homo sapiens
Biosample type
6
tissue
1
primary cell
Biosample term
1
artery
1
islet of Langerhans
1
liver
1
lung
1
pancreas
1
peripheral blood mononuclear cell
1
skeletal muscle
1
subcutaneous adipose tissue
Tissue term
1
adipose
1
artery
1
blood
1
liver
1
lung
1
pancreas
1
skeletal muscle tissue
Organ
1
adipose tissue
1
artery
1
blood
1
blood vessel
1
bodily fluid
1
connective tissue
1
liver
1
lung
1
musculature of body
1
pancreas
1
vasculature
Life stage
4
adult
Date released
4
April, 2025
1
August, 2021
1
September, 2021
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Xin Sun, UCSD
Project
4
AMP
1
LungMap
1
T1D
RFA
4
AMP
1
LungMap2
1
T1D
files.file_type!
mtx
Showing 6 of 6 results
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FileSet
DSR186384
released
Embeddings file set
: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR547861
released
Embeddings file set
: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR856740
released
Embeddings file set
: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR940154
released
Embeddings file set
: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D