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Clear Filters
Embeddings type
  • 7Accessible chromatin
Embeddings Category
  • 7umap
Underlying Assay
  • 3410X scRNA-seq
  • 28Smart-seq
  • 710X snATAC-seq
  • 610X snRNA-seq
  • 2sciATAC-seq
Available data
  • 7h5ad
  • 6tsv
  • 3mtx
  • 1bed bed3
  • 1cloupe
  • 1tbi
File set status
  • 7released
Organism
  • 7Homo sapiens
Biosample type
  • 7tissue
  • 1primary cell
Biosample term
  • 1artery
  • 1islet of Langerhans
  • 1liver
  • 1lung
  • 1pancreas
  • 1peripheral blood mononuclear cell
  • 1skeletal muscle
  • 1skeletal muscle tissue
  • 1subcutaneous adipose tissue
Tissue term
  • 2skeletal muscle tissue
  • 1adipose
  • 1artery
  • 1blood
  • 1liver
  • 1lung
  • 1pancreas
Organ
  • 2musculature of body
  • 1adipose tissue
  • 1artery
  • 1blood
  • 1blood vessel
  • 1bodily fluid
  • 1connective tissue
  • 1liver
  • 1lung
  • 1pancreas
  • 1vasculature
Life stage
  • 4adult
Date released
  • 4April, 2025
  • 1August, 2021
  • 1May, 2022
  • 1September, 2021
Lab
  • 5AMP-T2D consortium
  • 1Kyle Gaulton, UCSD
  • 1Xin Sun, UCSD
Project
  • 5AMP
  • 1LungMap
  • 1T1D
RFA
  • 5AMP
  • 1LungMap2
  • 1T1D

Showing 7 of 7 results

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  • FileSet

    DSR186384

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR547861

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR856740

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR940154

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR384UWH

    released

    Embeddings file set: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR722OVR

    released

    Embeddings file set: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
    Lab: Xin Sun, UCSD
    Project: LungMap
  • FileSet

    DSR047LET

    released

    Embeddings file set: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
    Lab: Kyle Gaulton, UCSD
    Project: T1D
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