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Clear Filters
Annotation type
  • 5chromatin state
  • 1gene expression
Annotation Category
  • 5cis-regulatory elements
  • 1Gene expression levels
Annotation type Category
  • 5ChIP-seq
  • 1RNA-seq
Available data
  • bed bed3+
  • 5bed bed9
  • 1tsv
File set status
  • 6released
Genome assembly (visualization)
  • 5GRCh38
  • 5hg19
Organism
  • 6Homo sapiens
Biosample type
  • 5tissue
  • 1cell line
Biosample term
  • 3Peyer's patch
  • 1GM18507
  • 1germinal center
  • 1small intestine - terminal Ileum
Organ
  • 2744vasculature
  • 2722blood vessel
  • 2667bodily fluid
  • 2665blood
  • 2641vein
  • 401epithelium
  • 341kidney
  • 141brain
  • 133connective tissue
  • 106pancreas
  • 96musculature of body
  • 79heart
  • 71lung
  • 67limb
  • 58intestine
  • 55liver
  • 44adipose tissue
  • 37embryo
  • 36skin of body
  • 35large intestine
  • 33extraembryonic component
  • 30artery
  • 25stomach
  • 19bone element
  • 19small intestine
  • 16placenta
  • 15adrenal gland
  • 14mammary gland
  • 14prostate gland
  • 13spinal cord
  • 13ureter
  • 11thymus
  • 10eye
  • 10gonad
  • 10nerve
  • 10penis
  • 9esophagus
  • 8lymph node
  • 7lymphatic vessel
  • 7spleen
  • 6lymphoid tissue
  • 6uterus
  • 5mouth
  • 5ovary
  • 5testis
  • 5thyroid gland
  • 3breast
  • 3skeleton
  • 3tongue
  • 3urinary bladder
  • 3vagina
  • 2bone marrow
  • 2bronchus
  • 1nose
  • 1pericardium
  • 1pituitary gland
Life stage
  • 4adult
  • 1unknown
Date released
  • 5September, 2022
  • 1March, 2024
Software used
  • 5chromhmm
  • 1r
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 5EpiMap
  • 1GTEx
RFA
  • 6AMP
files.file_type!
  • bed bed3+

Showing 6 of 6 results

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  • FileSet

    DSR115KNL

    released

    Annotation file set: Gene expression summary from GTEx V8 - Gene TPMs for Small Intestine - Terminal Ileum.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR503YIU

    released

    Annotation file set: Chromatin states for BSS00462 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR101HUX

    released

    Annotation file set: Chromatin states for BSS01428 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR714WLK

    released

    Annotation file set: Chromatin states for BSS01427 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR314BNS

    released

    Annotation file set: Chromatin states for BSS01426 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR910NQX

    released

    Annotation file set: Chromatin states for BSS00384 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
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