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Annotation type
3
eQTL
1
pQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
3
RNA-seq
1
quantitative proteomics
Available data
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
3
cartilage tissue
1
synovial joint
Organ
3
connective tissue
Life stage
4
adult
Date released
4
August, 2021
Software used
904
chromhmm
719
r
115
deseq2
111
qTLtools
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
deltasvm
13
macs
12
deeptools
12
samtools
12
umitools
9
limix
9
salmon
8
matrix-eQTL
7
fastqtl
5
unknown
4
peer
3
mach2qtl
3
sqtlseeker
2
emmax
1
altius-index
1
bimbam
haploview
1
minfi
1
snap
Lab
4
ITG
Project
4
ITG
RFA
4
ITG
files.file_type!
bed bed3+
software_used.software.name!
deltasvm
haploview
Showing 4 of 4 results
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Download
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG