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Schema
Citing CMDGA
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Assay category
3
3D chromatin structure
Assay
3
Hi-C
1
MPRA
1
pCHi-C
Project
3
HPAP
2
AMP
RFA
3
HPAP
2
AMP
Experiment status
5
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
1
in vitro differentiated cells
Organ
3
epithelium
3
pancreas
1
adipose tissue
1
connective tissue
Life stage
3
adult
1
unknown
Available data
4
bedpe bed3+
4
fastq
3
bam
bigWig
3
cool
3
hic
3
tsv
1
txt
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
4
DNA
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Replication type
3
anisogenic
2
unreplicated
Audit category:
3
audit script error
files.file_type!
bigWig
Showing 5 of 5 results
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Experiment
DSR700KTH
released
MPRA
of MIN6
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP