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Annotation type
1
accessible chromatin
1
eQTL
1
other
1
variant allelic effects
Annotation Category
2
Genetic variant effects
1
Others
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
RNA-seq
1
SNP-SELEX
Available data
46
bed bed3+
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
1
Pancreatic islets
1
caudate nucleus
1
naive regulatory T cell
1
purified protein and synthetic DNA oligo binding assay
Organ
1
brain
Life stage
1
adult
Date released
2
May, 2020
1
February, 2020
1
February, 2023
Software used
1
betacells_cytokines_t1d
1
gtex_eqtl:V8
Lab
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Project
3
AMP
1
T1D
Collection Tags
1
AMP
1
DGA
1
GTEx
RFA
3
AMP
1
T1D
files.file_type!
bigWig
organism.scientific_name!
Homo sapiens
Showing 4 of 4 results
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FileSet
DSR976GBT
released
Annotation file set
: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR606KIK
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal naive regulatory T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR010JKK
released
Annotation file set
: eQTL of caudate nucleus for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP