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Embeddings type
1
Accessible chromatin
1
Gene expression
Embeddings Category
2
umap
Available data
2
h5ad
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
skeletal muscle
Tissue term
2
skeletal muscle tissue
Organ
2
musculature of body
Life stage
2
adult
Date released
2
July, 2025
Encyclopedia version
1
fusion_consented.snatac.h5ad
1
fusion_consented.snrna_post_decontx.h5ad
Lab
54
AMP-T2D consortium
6
Kyle Gaulton, UCSD
2
Franck Mauvais-Jarvis Lab
2
Stephen Parker, UMich
2
Xin Sun, UCSD
1
Bing Ren, UCSD
Project
2
AMP
RFA
2
AMP2
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Showing 2 of 2 results
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FileSet
DSR291812
released
Embeddings file set
: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR144369
released
Embeddings file set
: Single-nucleus RNA-seq gene expression profiles after ambient RNA correction, with UMAP embeddings generated using Scanpy.
Lab:
Stephen Parker, UMich
Project:
AMP