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Embeddings type
1
Accessible chromatin
1
Gene expression
Cohort
1
HPAP
Embeddings Category
2
umap
Underlying Assay
1
10X scATAC-seq
Available data
h5ad
2
rds
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
heart
1
islet of Langerhans
Tissue term
1
heart
1
pancreas
Organ
1
heart
1
pancreas
Date released
1
June, 2025
1
March, 2024
Lab
13
AMP-T2D consortium
2
Franck Mauvais-Jarvis Lab
2
Kyle Gaulton, UCSD
Project
2
AMP
RFA
1
AMP
1
AMP2
files.file_type!
h5ad
Showing 2 of 2 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP