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Clear Filters
Embeddings type
5
Gene expression
2
Accessible chromatin
Cohort
1
HPAP
Embeddings Category
7
umap
Underlying Assay
5
10X scRNA-seq
1
10X scATAC-seq
1
10X snATAC-seq
Available data
h5ad
8
tsv
6
mtx
6
rds
File set status
7
released
Organism
5
Homo sapiens
Biosample type
7
tissue
Biosample term
3
islet of Langerhans
1
artery
1
liver
1
skeletal muscle
1
visceral fat
Tissue term
3
pancreas
1
blood vessel
1
fat pad
1
liver
1
muscle
Organ
3
pancreas
1
adipose tissue
1
artery
1
blood vessel
1
connective tissue
1
liver
1
musculature of body
1
vasculature
Life stage
4
adult
Date released
4
February, 2025
2
October, 2024
1
March, 2024
Software used
cellranger-atac
Lab
4
AMP-T2D consortium
2
Franck Mauvais-Jarvis Lab
1
Kyle Gaulton, UCSD
Project
5
AMP
2
community
RFA
5
AMP
2
community
files.file_type!
h5ad
software_used.software.name!
cellranger-atac
Showing 7 of 7 results
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FileSet
DSR928DPD
released
Embeddings file set
: This single-cell dataset is comprised of CAD patients and controls from STARNET. 60 samples.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024XGL
released
Embeddings file set
: This single-cell dataset is comprised of CAD patients and controls from STARNET. 30 samples.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR917JBY
released
Embeddings file set
: This single-cell dataset is comprised of CAD patients and controls from STARNET. 30 samples.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR941LCB
released
Embeddings file set
: This single-cell dataset is comprised of CAD patients and controls from STARNET. 140 samples.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR662TAR
released
Embeddings file set
: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR867WVO
released
Embeddings file set
: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP