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Schema
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Embeddings type
2
Accessible chromatin
2
Gene expression
Cohort
1
HPAP
Embeddings Category
4
umap
Underlying Assay
1
10X scATAC-seq
1
10X scRNA-seq
1
10X snATAC-seq
Available data
h5ad
2
mtx
1
rds
File set status
4
released
Organism
2
Homo sapiens
Biosample type
4
tissue
Biosample term
3
islet of Langerhans
1
pancreas
Tissue term
4
pancreas
2
heart
2
liver
1
artery
1
blood vessel
1
carotid canal
1
fat pad
1
hypothalamus
1
kidney
1
muscle
1
skeletal muscle
1
visceral abdominal adipose tissue
Organ
4
pancreas
Date released
2
October, 2024
1
June, 2025
1
March, 2024
Lab
2
Franck Mauvais-Jarvis Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
2
community
RFA
2
AMP
2
community
files.file_type!
h5ad
Showing 4 of 4 results
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FileSet
DSR975305
released
Embeddings file set
: Single cell reference map of human pancreatic islets
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR662TAR
released
Embeddings file set
: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR867WVO
released
Embeddings file set
: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab:
Franck Mauvais-Jarvis Lab
Project:
community
FileSet
DSR827MAZ
released
Embeddings file set
: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP