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Schema
Clear Filters
Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
1
10X snRNA-seq
Available data
6
h5ad
tsv
2
mtx
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
3
skeletal muscle
Tissue term
9
pancreas
4
heart
4
liver
3
blood
3
kidney
3
lung
3
skeletal muscle tissue
2
artery
2
fat pad
1
adipose
1
bladder organ
1
blood vessel
1
bone marrow
1
cell
1
endothelial cell
1
epithelial cell
1
eye
1
hypothalamus
1
large intestine
1
leukocyte
1
lymph node
1
major salivary gland
1
mammary gland
1
muscle
1
muscle organ
1
prostate gland
1
skeletal muscle
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
1
visceral abdominal adipose tissue
Organ
3
musculature of body
Life stage
3
adult
Date released
2
July, 2025
1
April, 2025
Encyclopedia version
1
fusion_consented.snatac.h5ad
1
fusion_consented.snrna_post_decontx.h5ad
Lab
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
RFA
2
AMP2
1
AMP
files.file_type!
tsv
Showing 3 of 3 results
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FileSet
DSR291812
released
Embeddings file set
: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR144369
released
Embeddings file set
: Single-nucleus RNA-seq gene expression profiles after ambient RNA correction, with UMAP embeddings generated using Scanpy.
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR603575
released
Embeddings file set
: This snRNAseq dataset is comprised of CAD patients and controls from STARNET.
Lab:
AMP-T2D consortium
Project:
AMP