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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA accessibility
3
DNA binding
Assay
4
DNase-seq
3
ChIP-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
4
tissue
3
in vitro differentiated cells
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Life stage
4
adult
3
unknown
Available data
138
bam
114
bigWig
88
bed narrowPeak
72
tsv
27
fastq
25
bigBed narrowPeak
7
bed bed3+
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Platform
3
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
3
36
1
50
Library made from
7
DNA
Date released
3
December, 2017
2
June, 2019
2
October, 2019
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
3
isogenic
Audit category:
1
inconsistent control read length
organ_slims!
lymph node
Showing 7 of 7 results
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Experiment
DSR387SDC
released
DNase-seq
of tibial artery
Homo sapiens
tibial artery male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR812YUA
released
DNase-seq
of tibial artery
Homo sapiens
tibial artery female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR806WVL
released
DNase-seq
of coronary artery
Homo sapiens
coronary artery female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR529UJE
released
DNase-seq
of coronary artery
Homo sapiens
coronary artery female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR642129
released
Audit warning
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR290464
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537658
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP