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Clear Filters
Annotation type
  • 3eQTL
  • 1pQTL
Annotation Category
  • 4Genetic variant effects
Annotation type Category
  • 3RNA-seq
  • 1Expression arrays
  • 1quantitative proteomics
Available data
  • 4bed bed3+
File set status
  • 4released
Genome assembly (visualization)
  • 4hg19
Organism
  • 4Homo sapiens
Biosample type
  • 4tissue
Biosample term
  • 2islet of Langerhans
  • 1cartilage tissue
  • 1subcutaneous adipose tissue
Organ
  • 2connective tissue
  • 2pancreas
  • 1adipose tissue
Life stage
  • 3adult
Date released
  • 2August, 2021
  • 2February, 2021
Software used
  • 2533macs
  • 1670r
  • 838encode-ccres
  • 250abc
  • 131chromhmm
  • 120deltasvm
  • 108qTLtools
  • 32cicero
  • 27chicago
  • 27nospecificsoft_customcode
  • 14hiccups
  • 14matrix-eQTL
  • 11rasqual
  • 7deseq2
  • 6eigenmt
  • 6limix
  • 6samtools
  • 5unknown
  • 4fastqtl
  • 2combined S2G strategy
  • 2minfi
  • 2mpraflow
  • 1bedops
  • 1betacells_cytokines_t1d
  • 1bimbam
  • 1cisgenome
  • 1e-range
  • 1epacts
  • 1fast-lmm
  • 1haploview
  • 1peer
  • 1pepatac
  • 1probabel
  • 1snap
  • 1spp
Lab
  • 2AMP-T2D consortium
  • 1ITG
  • 1Karen Mohlke, UNC
Project
  • 3AMP
  • 1ITG
Collection Tags
  • 2 T2DKP
  • 2AMP
  • 2DGA
  • 2T2DKP
RFA
  • 3AMP
  • 1ITG

Showing 4 of 4 results

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  • FileSet

    DSR524ZAH

    released

    Annotation file set: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
    Lab: ITG
    Project: ITG
  • FileSet

    DSR559WKO

    released

    Annotation file set: eQTL annotation of islet of Langerhans from PMID:28132686
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR023QMR

    released

    Annotation file set: Pancreatic islet eQTL summary statistics from the INSPIRE consortium
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR965YTD

    released

    Annotation file set: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
    Lab: Karen Mohlke, UNC
    Project: AMP
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