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Assay category
3
DNA accessibility
Assay
2
DNase-seq
1
ATAC-seq
Project
3
AMP
RFA
3
AMP
Experiment status
2
released
1
archived
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
1
brain
1
liver
1
pancreas
Life stage
2
embryonic
1
adult
Available data
187
fastq
178
bam
160
bigWig
111
bed narrowPeak
88
bigBed narrowPeak
34
tsv
17
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
3
bed broadPeak
2
bigBed broadPeak
2
csv
1
zippedFastqFolder
Platform
53
Illumina Genome Analyzer IIx
17
Illumina HiSeq 2000
15
Illumina Genome Analyzer IIe
9
Illumina Genome Analyzer
7
Illumina Genome Analyzer II
6
Illumina HiSeq 4000
4
Illumina NextSeq 500
3
Illumina HiSeq 2500
1
Illumina Genome Analyzer I
Run type
3
paired-ended
Read length (nt)
2
36
1
50
Library made from
3
DNA
Date released
2
November, 2018
1
March, 2019
Lab
2
AMP-T2D consortium
1
Mark McCarthy, Oxford
Replication type
2
anisogenic
1
unreplicated
Showing 3 of 3 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR479BAW
released
DNase-seq
of brain
Homo sapiens
brain embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP