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Assay category
4
DNA binding
1
DNA accessibility
Assay
4
ChIP-seq
1
ATAC-seq
Project
5
AMP
RFA
5
AMP
Experiment status
4
released
1
archived
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Target of assay
4
transcription factor
Biosample type
4
cell line
1
tissue
Organ
4
liver
1
pancreas
Life stage
4
child
1
adult
Available data
166
fastq
144
bam
110
bigWig
92
bed narrowPeak
76
bigBed narrowPeak
40
zippedFastqFolder
11
bed bed3+
5
bed broadPeak
5
tsv
4
bigBed broadPeak
Platform
4
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
4
single-ended
1
paired-ended
Read length (nt)
93
36
5
50
2
25
1
101
1
125
Library made from
5
DNA
Date released
4
November, 2017
1
March, 2019
Lab
4
AMP-T2D consortium
1
Mark McCarthy, Oxford
Replication type
4
isogenic
1
anisogenic
Showing 5 of 5 results
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Experiment
TSTSR921785
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
ZEB1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR768115
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
NR2F2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR744403
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CREB1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR400895
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MAX
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP