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Assay category
3
DNA binding
1
DNA accessibility
Assay
3
ChIP-seq
1
ATAC-seq
Project
4
AMP
RFA
3
AMP
1
AMP2
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Biosample type
4
tissue
Organ
3
brain
1
pancreas
Life stage
3
embryonic
1
adult
Available data
17
fastq
15
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Platform
2
Illumina Genome Analyzer II
2
Illumina HiSeq 2000
Run type
3
single-ended
1
paired-ended
Read length (nt)
3
36
1
125
Library made from
4
DNA
Date released
187
June, 2019
70
November, 2017
41
August, 2017
9
November, 2018
9
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Replication type
3
unreplicated
1
anisogenic
Audit category:
2
missing controlled_by
Showing 4 of 4 results
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Experiment
TSTSR202522
released
ChIP-seq
of brain
Homo sapiens
brain female embryo (120 days)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR072271
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR409697
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP