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Assay category
7
3D chromatin structure
Assay
7
Hi-C
Project
4
AMP
3
HPAP
RFA
3
AMP
3
HPAP
1
AMP2
Experiment status
7
released
Genome assembly (visualization)
6
hg19
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Organ
5
pancreas
4
epithelium
1
blood vessel
1
heart
1
vasculature
1
vein
Life stage
5
adult
1
embryonic
1
unknown
Available data
483
bam
467
bigWig
302
tsv
173
bed narrowPeak
129
fastq
116
tagAlign
68
bed bed3+
40
bigBed narrowPeak
26
bed broadPeak
24
bigBed broadPeak
8
hic
7
bedpe bed3+
6
bed bed3
5
txt
3
cool
2
csv
1
bedpe
1
tagAlign bed3+
Library made from
7
DNA
Date released
3
October, 2022
2
March, 2020
1
August, 2021
1
October, 2019
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Replication type
10
unreplicated
7
anisogenic
6
isogenic
Audit category:
3
audit script error
Showing 7 of 7 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR905BNL
released
Hi-C
of pancreas
Homo sapiens
pancreas female adult (30 years) and male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR786VPZ
released
Hi-C
of heart
Homo sapiens
heart embryo (57 days) and embryo (67 days)
Lab:
AMP-T2D consortium
Project:
AMP