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Clear Filters
Annotation type
  • 8chromatin state
Annotation Category
  • 8cis-regulatory elements
Annotation type Category
  • 8ChIP-seq
Available data
  • 2708tsv
  • 169bed bed3+
  • 32bed bed9
  • 31bigWig
  • 8bigBed bed9
  • 2txt
File set status
  • 8released
Genome assembly (visualization)
  • 8GRCh38
  • 8hg19
Organism
  • 8Homo sapiens
Biosample type
  • 6tissue
  • 2primary cell
Biosample term
  • 2aorta
  • 2endothelial cell of umbilical vein
  • 1ascending aorta
  • 1coronary artery
  • 1thoracic aorta
  • 1tibial artery
Organ
  • 10heart
  • 8blood vessel
  • 8vasculature
  • 6brain
  • 4limb
  • 3musculature of body
  • 2artery
  • 2connective tissue
  • 2epithelium
  • 2kidney
  • 2pancreas
  • 2vein
  • 1adipose tissue
  • 1liver
  • 1nerve
Life stage
  • 6adult
Date released
  • 4January, 2020
  • 2October, 2019
  • 1May, 2019
  • 1May, 2020
Software used
  • 8chromhmm
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR157HZX

    released

    Annotation file set: ChromHMM 18-state model for tibial artery from 26 ENCODE ChIP-seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR214PMG

    released

    Annotation file set: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR772SPX

    released

    Annotation file set: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR649MVO

    released

    Annotation file set: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR220DMW

    released

    Annotation file set: ChromHMM 16-state model for ascending aorta from ENCODE ChIP-seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR716IKT

    released

    Annotation file set: ChromHMM 4-state model for coronary artery from ENCODE ChIP-seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR371GSC

    released

    Annotation file set: ChromHMM 18-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR429DXE

    released

    Annotation file set: ChromHMM 15-state model for heart aorta from ENCODE ChIP-seq data. ROADMAP aorta Annotation
    Lab: AMP-T2D consortium
    Project: AMP
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