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Schema
Citing CMDGA
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Assay category
3
DNA binding
1
DNA accessibility
Assay
3
ChIP-seq
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Target of assay
3
transcription factor
1
RNA binding protein
Biosample type
3
cell line
1
tissue
Organ
3
liver
1
pancreas
Life stage
3
child
1
unknown
Available data
10
bam
10
fastq
9
bigWig
8
bed narrowPeak
4
bigBed narrowPeak
3
tar
Platform
3
Illumina Genome Analyzer
1
Illumina Genome Analyzer I
Run type
4
single-ended
Read length (nt)
148
36
140
76
102
100
76
50
30
40
11
27
9
25
8
41
8
101
4
35
4
75
2
32
2
74
1
20
1
30
1
51
1
72
Library made from
4
DNA
Date released
3
November, 2017
1
August, 2017
Lab
4
AMP-T2D consortium
Replication type
3
isogenic
1
unreplicated
files.file_type!
xls
month_released!
September, 2018
Showing 4 of 4 results
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Experiment
TSTSR829588
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR665514
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MYC
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978069
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP