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Annotation type
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
1
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
2412
bed bed3+
178
tsv
83
txt
14
bigWig
3
bigBed narrowPeak
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
pancreatic alpha cell
1
pancreatic beta cell
Organ
3
epithelium
3
pancreas
Life stage
3
adult
Date released
11
February, 2024
3
February, 2021
1
June, 2021
1
September, 2022
Software used
2
cicero
1
deltasvm
Lab
3
Kyle Gaulton, UCSD
Project
3
AMP
Collection Tags
2
T2DKP
2
DGA
1
T2DKP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR376KYK
released
Annotation file set
: pancreatic beta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR014OEB
released
Annotation file set
: pancreatic alpha cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR884MOQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic alpha cell snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP