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Clear Filters
Annotation type
  • 4variant allelic effects
  • 3target gene predictions
Annotation Category
  • 4Genetic variant effects
  • 3Target gene links
Annotation type Category
  • 7snATAC-seq
Available data
  • 3576tsv
  • 3551bed bed3+
  • 869bed bed9
  • 108txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
File set status
  • 7released
Genome assembly (visualization)
  • 7hg19
Organism
  • 7Homo sapiens
Biosample type
  • 7primary cell
Biosample term
  • 2pancreatic alpha cell
  • 2pancreatic beta cell
  • 2pancreatic delta cell
  • 1pancreatic polypeptide-secreting cell
Organ
  • 7epithelium
  • 7pancreas
Life stage
  • 7adult
Date released
  • 3February, 2021
  • 3February, 2024
  • 1September, 2022
Software used
  • macs
  • 4deltasvm
  • 3cicero
Lab
  • 7Kyle Gaulton, UCSD
Project
  • 7AMP
Collection Tags
  • 4T2DKP
  • 3 T2DKP
  • 3DGA
RFA
  • 7AMP
software_used.software.name!
  • macs

Showing 7 of 7 results

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  • FileSet

    DSR236XNZ

    released

    Annotation file set: pancreatic delta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR376KYK

    released

    Annotation file set: pancreatic beta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR014OEB

    released

    Annotation file set: pancreatic alpha cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR260PUK

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic gamma cell snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR964IEU

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic delta cell snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR450SMN

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic beta cell snATAC-seq
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR884MOQ

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic alpha cell snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
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