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Clear Filters
Annotation type
  • 3accessible chromatin
  • 1target gene predictions
Annotation Category
  • 3cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 3ATAC-seq
  • 1snATAC-seq
Available data
  • 1678bed bed3+
  • 833bed bed9
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  • 3xls
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File set status
  • 4released
Genome assembly (visualization)
  • 4hg19
  • 1GRCh38
Organism
  • 4Homo sapiens
Biosample type
  • 3primary cell
  • 1tissue
Biosample term
  • 2aortic endothelial cell
  • 1islet of Langerhans
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Organ
  • 3epithelium
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  • 2vasculature
Life stage
  • 2adult
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Date released
  • 222November, 2021
  • 65January, 2020
  • 53May, 2020
  • 38February, 2024
  • 28January, 2021
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  • 19April, 2020
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  • 14February, 2021
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  • 9October, 2019
  • 7May, 2022
  • 4January, 2022
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  • 2May, 2019
  • 2November, 2020
  • 1June, 2021
Software used
  • 3macs
  • 1cicero
Lab
  • 3AMP-T2D consortium
  • 1Kyle Gaulton, UCSD
Project
  • 4AMP
Collection Tags
  • 2AMP
  • 1 T2DKP
  • 1DGA
RFA
  • 4AMP

Showing 4 of 4 results

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  • FileSet

    DSR704VCJ

    released

    Annotation file set: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces disturbed flow(DF) using ATAC-Seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR463OXW

    released

    Annotation file set: Accessible chromatin of human aortic endothelial cells (HAEC) in response to shear stress forces unidirectional flow(UF) using ATAC-Seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR236XNZ

    released

    Annotation file set: pancreatic delta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    TSTSR507522

    released

    Annotation file set: Merged ATAC-seq sites in islets for 23 samples including 4 from Bing Ren at UCSD, 2 from Stephen Parker at UMich, and 17 from Mark McCarthy at Oxford (HP1507 and HP1507UW)
    Lab: AMP-T2D consortium
    Project: AMP
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