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Schema
Citing CMDGA
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Assay category
3
3D chromatin structure
1
DNA sequencing
Assay
3
Hi-C
1
whole genome sequencing assay
Project
3
HPAP
1
AMP
RFA
3
HPAP
1
AMP2
Experiment status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
epithelium
3
pancreas
1
liver
Life stage
3
adult
1
unknown
Available data
3174
bam
2959
bigWig
1607
bed narrowPeak
1600
tsv
1358
fastq
832
bigBed narrowPeak
398
tagAlign
161
txt
153
zippedFastqFolder
135
bed broadPeak
98
bigBed broadPeak
86
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Library made from
4
DNA
Date released
3
October, 2022
1
August, 2021
Lab
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Replication type
3
anisogenic
1
unreplicated
Audit category:
3
audit script error
month_released!
June, 2019
Showing 4 of 4 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP