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Schema
Citing CMDGA
Clear Filters
Assay category
4
3D chromatin structure
3
DNA binding
Assay
4
Hi-C
3
ChIP-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Target of assay
3
transcription factor
1
RNA binding protein
Biosample type
4
primary cell
3
cell line
Organ
4
liver
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
Life stage
4
unknown
3
child
Available data
3142
bam
2959
bigWig
1628
bed narrowPeak
1584
tsv
1317
fastq
972
bigBed narrowPeak
349
tagAlign
313
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
161
txt
134
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Platform
3
Illumina Genome Analyzer
Run type
3
single-ended
Read length (nt)
3
35
Library made from
7
DNA
Date released
4
July, 2019
3
November, 2017
October, 2019
Lab
7
AMP-T2D consortium
Replication type
7
isogenic
month_released!
October, 2019
September, 2020
Showing 7 of 7 results
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Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR829588
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR665514
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MYC
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978069
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP