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Embeddings type
1
Accessible chromatin
1
Gene expression
Embeddings Category
2
umap
Underlying Assay
1
10X scRNA-seq
Available data
39
h5ad
7
mtx
5
tsv
2
rds
1
bed bed3
1
cloupe
1
tbi
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
kidney
1
skeletal muscle
Tissue term
1
kidney
1
skeletal muscle tissue
Organ
1
kidney
1
musculature of body
Life stage
2
adult
Date released
1
July, 2025
1
September, 2023
Encyclopedia version
1
fusion_consented.snatac.h5ad
Lab
Kyle Gaulton, UCSD
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
lab.title!
Kyle Gaulton, UCSD
Showing 2 of 2 results
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FileSet
DSR291812
released
Embeddings file set
: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR772NPS
released
Embeddings file set
: This single-cell dataset is comprised of Healthy Reference: biopsy samples from the Human Cell Atlas participants, CKD: biopsy samples from the KPMP Main Study protocol participants, and AKI: biopsy samples from the KPMP Main Study protocol participants.
Lab:
AMP-T2D consortium
Project:
AMP