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Clear Filters
Embeddings type
  • 6Accessible chromatin
  • 2Gene expression
Embeddings Category
  • 8umap
Underlying Assay
  • 510X snATAC-seq
  • 210X snRNA-seq
  • 1sciATAC-seq
Available data
  • 49h5ad
  • 9tsv
  • 7mtx
  • 6rds
  • 1bed bed3
  • cloupe
  • 1tbi
File set status
  • 8released
Organism
  • 7Homo sapiens
Biosample type
  • 7tissue
Biosample term
  • 2skeletal muscle tissue
  • 1artery
  • 1heart
  • 1liver
  • 1skeletal muscle
  • 1subcutaneous adipose tissue
  • 1tissues
Tissue term
  • 3skeletal muscle tissue
  • 1adipose
  • 1artery
  • 1heart
  • 1liver
  • 1tissues
Organ
  • 3musculature of body
  • 1adipose tissue
  • 1artery
  • 1blood vessel
  • 1connective tissue
  • 1heart
  • 1liver
  • 1vasculature
Life stage
  • 5adult
Date released
  • 4April, 2025
  • 2May, 2022
  • 1February, 2023
  • 1November, 2021
Lab
  • 7AMP-T2D consortium
  • 1Bing Ren, UCSD
Project
  • 7AMP
  • 1ENCODE
RFA
  • 7AMP
  • 1ENCODE3
files.file_type!
  • cloupe

Showing 8 of 8 results

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  • FileSet

    DSR186384

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR547861

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR856740

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR940154

    released

    Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR549TWY

    released

    Embeddings file set: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR493VFJ

    released

    Embeddings file set: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR384UWH

    released

    Embeddings file set: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR838CLG

    released

    Embeddings file set: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
    Lab: Bing Ren, UCSD
    Project: ENCODE
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