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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
6
Homo sapiens
Target of assay
3
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Biosample type
6
tissue
Organ
2
adipose tissue
2
connective tissue
2
liver
2
pancreas
Life stage
6
adult
Available data
6
bam
6
fastq
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
Platform
3
Illumina HiSeq 2000
2
Illumina Genome Analyzer
1
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
3
36
2
51
1
50
Mapped read length (nt)
5
50
4
36
2
51
Library made from
6
DNA
Date released
4
August, 2017
2
October, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
Audit category:
1
inconsistent control read length
organ_slims!
bone element
Showing 6 of 6 results
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Experiment
TSTSR141NSK
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR824SDJ
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (60 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132740
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999552
released
Audit warning
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR326690
released
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP