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Citing CMDGA
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Assay category
2
DNA accessibility
1
DNA binding
Assay
2
FAIRE-seq
1
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
2
tissue
1
cell line
Organ
2
pancreas
1
liver
Life stage
1
adult
1
child
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
1
bed broadPeak
1
bigBed broadPeak
Platform
562
Illumina HiSeq 2000
218
Illumina NovaSeq 6000
188
Illumina HiSeq 2500
152
Illumina HiSeq 4000
142
Illumina Genome Analyzer IIx
106
Illumina Genome Analyzer
60
Illumina NextSeq 500
38
HiSeq HighOutput V4
26
Illumina Genome Analyzer II
16
Illumina Genome Analyzer IIe
8
HiSeq 1500
7
MiSeq
5
Illumina HiSeq X Ten
3
Illumina Genome Analyzer I
2
Applied Biosystems SOLiD System 3 Plus
Run type
3
single-ended
Read length (nt)
1
35
1
36
1
50
Library made from
3
DNA
Date released
1
August, 2017
1
November, 2017
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
1
unreplicated
organ_slims!
bone element
intestine
Showing 3 of 3 results
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Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR580557
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP