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Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
9
histone
9
histone modification
8
control
8
transcription factor
5
broad histone mark
3
RNA binding protein
3
narrow histone mark
Biosample type
3
tissue
Organ
2
pancreas
1
brain
Life stage
2
unknown
1
embryonic
Available data
3
bam
3
bed narrowPeak
3
bigWig
3
fastq
1
bed bed3+
1
bed broadPeak
1
bigBed narrowPeak
1
tagAlign
Platform
31
Illumina HiSeq 2000
27
Illumina HiSeq 2500
23
Illumina Genome Analyzer IIx
20
Illumina Genome Analyzer
8
Illumina Genome Analyzer IIe
3
Illumina Genome Analyzer II
2
MiSeq
1
Illumina Genome Analyzer I
Run type
3
single-ended
Read length (nt)
3
36
Library made from
3
DNA
Date released
2
August, 2017
1
October, 2017
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
anisogenic
Audit category:
1
missing controlled_by
Showing 3 of 3 results
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Experiment
TSTSR409697
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR272540
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (47 years) and male (54 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR101497
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (47 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP