Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Assay category
  • 2DNA accessibility
Assay
  • 1ATAC-seq
  • 1DNase-seq
Project
  • 2AMP
RFA
  • 2AMP
Experiment status
  • 2released
Genome assembly (visualization)
  • 2GRCh38
  • 1hg19
Organism
  • 2Homo sapiens
Biosample type
  • 2tissue
Organ
  • 62liver
  • 51pancreas
  • 45epithelium
  • 14embryo
  • 10blood
  • 10bodily fluid
  • 9connective tissue
  • 7spleen
  • 4adipose tissue
  • 2brain
Life stage
  • 1adult
  • 1embryonic
Available data
  • 2bam
  • 2bigWig
  • 2fastq
  • 1bed bed3+
  • 1bed broadPeak
  • 1bed narrowPeak
  • 1bigBed broadPeak
  • 1bigBed narrowPeak
Platform
  • 7Illumina Genome Analyzer
  • 6Illumina Genome Analyzer II
  • 5Illumina HiSeq 2000
  • 2Illumina HiSeq 2500
  • 1Illumina Genome Analyzer IIx
  • 1Illumina NextSeq 500
Run type
  • 1paired-ended
  • 1single-ended
Read length (nt)
  • 136
  • 150
Library made from
  • 2DNA
Date released
  • 1November, 2018
  • 1October, 2017
Lab
  • 2AMP-T2D consortium
Replication type
  • 2unreplicated

Showing 2 of 2 results

table-tab-iconmatrix-icon

  • Experiment

    TSTSR479BAW

    released

    DNase-seq of brain
    Homo sapiens brain embryo (80 days)
    Lab: AMP-T2D consortium
    Project: AMP
  • Experiment

    TSTSR656713

    released

    ATAC-seq of cerebellum (Hemisphere)
    Homo sapiens cerebellum male adult (20 years)
    Lab: AMP-T2D consortium
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego