Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Assay category
1
DNA accessibility
1
Transcription
Assay
1
DNase-seq
1
single cell RNA-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Organ
50
pancreas
42
epithelium
2
connective tissue
1
adipose tissue
1
brain
1
spleen
Life stage
2
adult
Available data
2
bam
2
bigWig
2
fastq
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tsv
Platform
32
Illumina HiSeq 2000
31
Illumina Genome Analyzer
13
Illumina HiSeq 4000
9
Illumina HiSeq 2500
8
HiSeq 1500
7
Illumina Genome Analyzer II
2
Illumina NextSeq 500
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
36
1
75
Library insert size (nt)
1
>200
Library made from
1
DNA
1
RNA
Date released
1
April, 2018
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
unreplicated
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR663505
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (56 years) and male adult (22 years)
Lab:
AMP-T2D consortium
Project:
AMP