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Schema
Citing CMDGA
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Assay category
4
DNA binding
1
DNA methylation
Assay
4
ChIP-seq
1
WGBS
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
4
hg19
Organism
5
Homo sapiens
Target of assay
4
transcription factor
1
RNA binding protein
Biosample type
4
cell line
1
tissue
Organ
3
blood
3
bodily fluid
1
liver
1
pancreas
Life stage
4
adult
1
child
Available data
5
bam
5
bigWig
5
fastq
4
bed narrowPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Platform
3
Illumina HiSeq 4000
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
4
paired-ended
1
single-ended
Read length (nt)
26
76
17
40
17
100
16
36
5
50
5
101
5
151
4
25
1
30
1
97
1
105
Library made from
5
DNA
Date released
93
August, 2017
76
February, 2023
41
May, 2022
26
September, 2018
6
February, 2018
5
November, 2018
2
November, 2017
2
October, 2018
1
December, 2018
Lab
5
AMP-T2D consortium
Replication type
4
isogenic
1
unreplicated
month_released!
November, 2020
Showing 5 of 5 results
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Experiment
TSTSR918KHI
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
ARNT
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR438TAQ
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
ZBTB33
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR359JYX
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
ZNF622
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR516CEC
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
ZNF24
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR515GJS
released
WGBS
of pancreas
Homo sapiens
pancreas male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP