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Schema
Citing CMDGA
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Assay category
4
DNA methylation
2
Transcription
Assay
4
WGBS
2
single cell RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
GRCh38
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Organ
2
pancreas
2
spleen
liver
Life stage
6
adult
Available data
6
fastq
4
bam
4
bed bedMethyl
4
bigBed bedMethyl
4
bigWig
2
csv
Platform
4
Illumina HiSeq X Ten
2
Illumina HiSeq 2500
Run type
6
paired-ended
Read length (nt)
249
101
186
100
142
36
101
50
95
76
91
51
61
8
59
75
33
90
27
43
23
98
22
49
20
16
20
28
15
26
14
102
10
91
8
41
7
24
6
35
4
40
4
44
4
61
4
94
4
151
3
67
2
37
2
38
2
70
2
97
2
150
1
20
1
69
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
4
DNA
2
RNA
Date released
5
November, 2018
1
September, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
organ_slims!
large intestine
liver
Showing 6 of 6 results
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Experiment
TSTSR478JMV
released
WGBS
of spleen
Homo sapiens
spleen male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR197AYP
released
WGBS
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR950TQA
released
WGBS
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR820HBA
released
WGBS
of body of pancreas
Homo sapiens
body of pancreas male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR728QVV
released
single cell RNA-seq
of pancreatic cell
Homo sapiens
pancreatic cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR461MDN
released
single cell RNA-seq
of pancreatic cell
Homo sapiens
pancreatic cell female adult (51 year) and male adult (17 years) and male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP