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Assay category
2
DNA binding
1
DNA accessibility
Assay
2
ChIP-seq
1
DNase-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Target of assay
1
control
1
histone
1
histone modification
1
narrow histone mark
Biosample type
3
tissue
Organ
122
liver
52
pancreas
31
epithelium
20
brain
18
embryo
6
vasculature
4
connective tissue
3
adipose tissue
3
blood vessel
2
musculature of body
1
blood
1
bodily fluid
1
spleen
Life stage
3
adult
Available data
3
bam
3
fastq
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Platform
2
Illumina HiSeq 2000
1
Illumina HiSeq 4000
1
Illumina NextSeq 500
Run type
2
single-ended
1
paired-ended
Read length (nt)
26
100
9
76
3
36
3
101
2
49
2
50
1
69
Mapped read length (nt)
2
36
Library made from
3
DNA
Date released
2
August, 2017
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
Showing 3 of 3 results
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Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132740
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP