Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
narrow histone mark
Biosample type
4
primary cell
2
in vitro differentiated cells
Organ
4
pancreas
2
epithelium
2
liver
Life stage
4
adult
2
embryonic
Available data
6
bam
6
bigWig
6
fastq
3
bed narrowPeak
2
bigBed narrowPeak
Platform
4
Illumina HiSeq 2000
2
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
264
36
252
101
235
100
206
50
204
76
91
51
61
8
59
75
51
40
33
90
27
43
23
98
22
49
20
16
20
28
15
26
14
27
14
102
11
25
10
35
10
91
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
94
3
67
2
37
2
38
2
70
2
74
2
97
2
150
1
20
1
30
1
69
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
6
DNA
Date released
3
August, 2017
2
December, 2017
1
September, 2018
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
Audit category:
4
missing controlled_by
files.read_length!
43
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR248LEQ
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell female adult (48 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR284274
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR184394
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR690557
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR179007
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR846115
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP