Search – Common Metabolic Diseases Genome Atlas

Showing 9 of 9 results

Publication
released
The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans
Tabula Sapiens Consortium*; Robert C Jones, Jim Karkanias, Mark A Krasnow, et al.
Science. 2022-05-13;376(6594):eabl4896.
- doi:10.1126/science.abl4896
- PMID:35549404
Available supplemental data: website
URL: http://tabula-sapiens-portal.ds.czbiohub.org/
Data summary: The entire dataset can be explored interactively at http://tabula-sapiens-portal.ds.czbiohub.org/.
Available supplemental data: website
URL: https://doi.org/10.5281/zenodo.6069683
Data summary: The code used for the analysis is available from Zenodo (https://doi.org/10.5281/zenodo.6069683).
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14267219
Data summary: Gene counts and metadata are available from figshare…
Available supplemental data: website
URL: https://registry.opendata.aws/tabula-sapiens/
Data summary: The raw data files are available from a public AWS S3 bucket…
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14962947
Data summary: The histology images are available from figshare (https://doi.org/10.6084/m9.figshare.14962947).
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14977281
Data summary: SpliZ scores are available from figshare (https://doi.org/10.6084/m9.figshare.14977281).
Publication
released
A human cell atlas of fetal gene expression
Junyue Cao, Diana R O'Day, Hannah A Pliner, et al.
Science. 2020-11-13;370(6518):eaba7721.
Available supplemental data: website
File format: other format
URL: https://descartes.brotmanbaty.org/bbi/human-chromatin-during-development/
Data summary: sci-ATAC-seq data of human fetal tissues:…
Publication
released
A human cell atlas of fetal chromatin accessibility
Silvia Domcke, Andrew J Hill, Riza M Daza, et al.
Science. 2020-11-13;370(6518):eaba7612.
Available supplemental data: website
File format: other format
URL: https://descartes.brotmanbaty.org/bbi/human-chromatin-during-development/
Data summary: sci-ATAC-seq data of human fetal tissues:…
Publication
released
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium.
Science. 2020-09-11;369(6509):1318-1330.
Publication
released
Exploring genetic interaction manifolds constructed from rich single-cell phenotypes
Thomas M Norman, Max A Horlbeck, Joseph M Replogle, et al.
Science. 2019-08-23;365(6455):786-793.
Publication
released
Single-cell Transcriptomes Identify Human Islet Cell Signatures And Reveal Cell-type–specific Expression Changes In Type 2 Diabetes
Nathan Lawlor, Joshy George, Mohan Bolisetty, et al.
Genome Research. 2017-02-01;27(2):208-222.
- doi:10.1101/gr.212720.116
- PMID:27864352
Publication
released
Prepatterning Of Differentiation-driven Nuclear Lamin A/C-associated Chromatin Domains By GlcNAcylated Histone H2B
Torunn Rønningen, Akshay Shah, Anja R. Oldenburg, et al.
Genome Research. 2015-12;25(12):1825-1835.
- doi:10.1101/gr.193748.115
- PMID:26359231
Publication
released
Acute TNF-induced Repression Of Cell Identity Genes Is Mediated By NFκB-directed Redistribution Of Cofactors From Super-enhancers
Søren Fisker Schmidt, Bjørk Ditlev Larsen, Anne Loft, et al.
Genome Research. 2015-09;25(9):1281-1294.
- doi:10.1101/gr.188300.114
- PMID:26113076
Publication
released
Genome-wide Analysis Of Histone Modifications In Human Pancreatic Islets
Reena Bhandare, Jonathan Schug, John Le Lay, et al.
Genome Research. 2010-04;20(4):428-433.
- doi:10.1101/gr.102038.109
- PMID:20181961

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Showing 9 of 9 results