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Annotation type
7
eQTL
Annotation Category
7
Genetic variant effects
Annotation type Category
7
RNA-seq
Available data
5
bed bed3+
2
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
2
articular chondrocyte
1
endothelial cell
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
3
connective tissue
2
musculature of body
1
epithelium
Life stage
2
adult
Date released
5
February, 2024
2
May, 2024
Software used
328
macs
263
r
250
abc
110
deseq2
56
deltasvm
37
chromhmm
30
cicero
25
seurat
12
deeptools
12
samtools
12
umitools
9
salmon
7
qTLtools
6
eigenmt
6
rasqual
5
chicago
5
fastqtl
5
peer
3
matrix-eQTL
1
bedops
1
betacells_cytokines_t1d
1
pepatac
1
spp
Lab
AMP-T2D consortium
5
Stephen Parker, UMich
2
Doug Phanstiel, UNC
Project
5
AMP
2
community
RFA
5
AMP2
2
community
lab.title!
AMP-T2D consortium
month_released!
February, 2021
organ_slims!
testis
Showing 7 of 7 results
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Download
FileSet
DSR602VGF
released
Annotation file set
: eQTL of primary articular chondrocytes treated with fibronectin fragment (FN-f) from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR932ZJL
released
Annotation file set
: eQTL of primary articular chondrocytes treated with PBS from 101 donors
Lab:
Doug Phanstiel, UNC
Project:
community
FileSet
DSR829NMX
released
Annotation file set
: Expression QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR355IUU
released
Annotation file set
: Expression QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR727SYE
released
Annotation file set
: Expression QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP