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Getting started
Schema
Clear Filters
Annotation type
2638
pQTL
1709
candidate regulatory elements
1357
target gene predictions
977
histone modifications
913
chromatin state
901
accessible chromatin
817
binding sites
673
gene expression
484
differential activity
166
eQTL
141
variant allelic effects
74
Fine-mapped variants
8
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Annotation Category
5318
cis-regulatory elements
3047
Genetic variant effects
1357
Target gene links
1157
Gene expression levels
2
Others
Annotation type Category
5217
ChIP-seq
3064
DNase-seq
2638
quantitative proteomics
541
RNA-seq
503
ATAC-seq
431
snATAC-seq
305
single cell RNA-seq
189
HiC
147
scRNA-seq
139
H3K27ac ChIP-Seq
84
snDropSeq
47
pCHi-C
17
Expression arrays
5
Capture-C
4
RNA microarray
4
snRNA-seq
3
DNA methylation profiling by array assay
1
SNP-SELEX
Available data
6031
bed bed3+
3530
tsv
869
bed bed9
546
bigWig
112
txt
40
bigBed bed9
34
bed bed9+
26
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
File set status
10879
released
1
archived
1
revoked
Genome assembly (visualization)
6937
hg19
1909
GRCh38
4
hg18
Organism
10833
Homo sapiens
Biosample type
5272
tissue
2791
primary cell
2347
cell line
466
in vitro differentiated cells
3
stem cell
Biosample term
2636
whole blood
135
monocyte
92
heart
86
stomach
81
kidney
73
brain
68
lung
67
muscle of arm
65
endothelial cell
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
B cell
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
53
H1-hESC
52
left lung
52
macrophage
51
CD8-positive, alpha-beta T cell
51
neural progenitor cell
48
thymus
47
liver
45
fibroblast
45
right lung
44
islet of Langerhans
44
natural killer cell
43
T cell
43
hematopoietic multipotent progenitor cell
42
hepatocyte
42
right kidney
40
K562
40
renal cortex interstitium
40
renal pelvis
40
retina
40
smooth muscle cell
37
adipocyte
36
left kidney
35
cardiac muscle cell
35
spinal cord
34
heart left ventricle
34
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
adipose tissue
31
pancreatic ductal cell
28
regulatory T cell
26
MCF-7
25
epithelial cell of proximal tubule
25
tibial nerve
24
body of pancreas
24
pericyte cell
23
EndoC_BH1
23
T-helper 1 cell
23
neuron
23
sigmoid colon
22
CD8-positive, alpha-beta memory T cell
22
dendritic cell
22
foreskin keratinocyte
22
pancreas
21
T-helper 17 cell
21
caudate nucleus
21
glomerular endothelial cell
21
trophoblast cell
20
breast cancer cell
20
coronary artery
20
mononuclear cell
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
astrocyte
19
endothelial cell of lymphatic vessel
19
foreskin fibroblast
19
heart right ventricle
19
keratinocyte
19
right atrium auricular region
19
subcutaneous adipose tissue
18
HFFc6
18
embryonic stem cell
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
18
mast cell
18
pancreatic beta cell
18
pericyte
18
thyroid gland
18
tibial artery
18
transverse colon
17
T-helper 2 cell
17
muscle of trunk
17
omental fat pad
17
osteoblast
17
pancreatic acinar cell
17
pancreatic alpha cell
17
testis
16
HepG2
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
hepatic stellate cell
16
induced pluripotent stem cell
16
retinal pigment epithelial cell
16
skeletal muscle tissue
15
CD4-positive, alpha-beta T cell
15
GM12878
15
ascending aorta
15
cerebellum
15
endocardial cell
15
fibroblast of lung
15
frontal cortex
15
layer of hippocampus
15
mammary gland epithelial cell
15
mesenchymal stem cell
15
neutrophil
15
pancreatic delta cell
15
skeletal muscle myoblast
15
substantia nigra
14
H9
14
endocrine pancreas
14
prostate gland
14
putamen
14
upper lobe of left lung
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
12
fibroblast of dermis
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
12
neuronal stem cell
11
Ammon's horn
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
mammary epithelial cell
11
right renal pelvis
11
skeletal muscle satellite cell
10
22Rv1
10
Rhabdomyosarcoma