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Assay category
2
3D chromatin structure
1
DNA accessibility
1
Transcription
Assay
3
STARR-seq
2
Hi-C
1
ATAC-seq
1
total RNA-seq
Project
7
AMP
RFA
7
AMP2
Experiment status
7
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
4
tissue
3
cell line
Organ
liver
4
pancreas
2
kidney
Life stage
4
adult
3
unknown
Available data
1
bedpe
1
bedpe bed3+
1
hic
1
tsv
Library made from
4
RNA
3
DNA
Date released
5
August, 2021
2
March, 2019
Lab
3192
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
2
Stephen Parker, UMich
1
ITG
1
Maike Sander, UCSD
Replication type
4
anisogenic
2
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
organ_slims!
liver
Showing 7 of 7 results
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Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR595NST
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (55 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR894OMX
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR090FJR
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR043623
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR081148
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (59 years) and male adult (35 years) and male adult (55 years) and male adult (57 years)
Lab:
Bing Ren, UCSD
Project:
AMP