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Annotation type
1
caQTL
1
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
2
RNA-seq
1
ATAC-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
subcutaneous adipose tissue
1
liver
Organ
2
adipose tissue
2
connective tissue
1
liver
Life stage
2
adult
Date released
2
February, 2021
1
May, 2022
Software used
1
eigenmt
1
fastqtl
macs
1
r
1
rasqual
Lab
7256
AMP-T2D consortium
281
KPMP
165
Bing Ren, UCSD
139
Jesse Engreitz, Stanford University
133
Kyle Gaulton, UCSD
53
Stephen Parker, UMich
33
Katalin Susztak, Upenn
19
Xin Sun, UCSD
9
Anna Gloyn, Oxford
9
Ines Cebola, Imperial College London
5
ITG
5
Patrick T. Ellinor, Broad
5
Struan F.A. Grant, CHOP
4
Doug Phanstiel, UNC
3
Karen Mohlke, UNC
3
Stephen S. Rich Lab @UVA
Project
3
AMP
Collection Tags
3
DGA
2
T2DKP
1
AMP
RFA
3
AMP
software_used.software.name!
macs
Showing 3 of 3 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR306BCP
released
Annotation file set
: Gene expression annotation of subcutaneous adipose tissue for GSE135134
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP