Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 111 results

FileSet
DSR277790
released
Annotation file set: Accessible chromatin sites for Muscle tenogenic cells (TNMD/MKX+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR585401
released
Annotation file set: Accessible chromatin sites for Muscle smooth muscle (MECOM/SFTPB+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR006053
released
Annotation file set: Accessible chromatin sites for Muscle myoblasts (cycling) (PAX7+ and G2/M cell cycle states; somewhat higher markers TOP2A/CENPE+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR928839
released
Annotation file set: Accessible chromatin sites for Muscle endothelial (PECAM1;VWF;ESAM+; mostly PCW17)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR193315
released
Annotation file set: Accessible chromatin sites for Muscle endothelial (MECOM/VWF+; also expressing VEGF recepors (KDR/FLT4/NRP2))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR064048
released
Annotation file set: Accessible chromatin sites for Muscle fibroblasts (FBN1+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR917153
released
Annotation file set: Accessible chromatin sites for Muscle myogenic progenitors (PAX3+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR192300
released
Annotation file set: Accessible chromatin sites for Muscle myogenic progenitors (PAX3+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR977308
released
Annotation file set: Accessible chromatin sites for Muscle keratinocytes (KRT4/17+, SCEL)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR153890
released
Annotation file set: Accessible chromatin sites for Muscle myocytes (fast/Type II) (high PAX7; high TTN/MYLPF; Myosin heavy chain embryonic (MYH3)+; high MYOG/PAX7 low PAX3 (PMID: 32396864))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR035630
released
Annotation file set: Accessible chromatin sites for Muscle pericytes (low UMI; ITGA1+ TRPC6+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR116708
released
Annotation file set: Accessible chromatin sites for Muscle myocytes (clusters with 0/2/10/16)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR494217
released
Annotation file set: Accessible chromatin sites for Muscle myoblasts (PAX7+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR453770
released
Annotation file set: Accessible chromatin sites for Muscle myocytes (slow/Type I) (MYH7+; MYOD1-low but MYOG/ACTC1 high (PMID: 37003036); TNNT1 contractile gene)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR772521
released
Annotation file set: Accessible chromatin sites for Muscle macrophages (expression of macrophage markers inlcuding PTPRC/MRC/F13A1)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR905915
released
Annotation file set: Accessible chromatin sites for Muscle pericytes (RGS5/KCNJ8)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR537001
released
Annotation file set: Accessible chromatin sites for Muscle keratinocytes (KRT10/SCEL)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR838334
released
Annotation file set: Accessible chromatin sites for Muscle myogenic progenitors (PAX3+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR620820
released
Annotation file set: Accessible chromatin sites for Muscle endothelial (PECAM1;VWF;ESAM+; mostly PCW17)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR549220
released
Annotation file set: Accessible chromatin sites for Muscle myocytes (slow/Type I) (MYBPC1/MYH7B/TNNT1 (PMID: PMC9569562); MYOD1-low but MYOG/ACTC1 high (PMID: 37003036); TNNT1 contractile gene; MUSK+ (neuromuscular synaptic gene))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR653135
released
Annotation file set: Accessible chromatin sites for Muscle smooth muscle (low UMI; MYLK high; mostly PCW17; G2/M phases)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR838920
released
Annotation file set: Accessible chromatin sites for Muscle myocytes (fast/Type II) (high TTN/MYLPF; high MYOG; low PAX3 (PMID: 32396864))
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR746953
released
Annotation file set: Target gene predictions for Muscle myogenic progenitors (PAX3+)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR346596
released
Annotation file set: Target gene predictions for Muscle keratinocytes (KRT4/17+, SCEL)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR849216
released
Annotation file set: Target gene predictions for Muscle pericytes (low UMI; ITGA1+ TRPC6+)
Lab: AMP-T2D consortium
Project: AMP